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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs56388155 chr3:96791737 G/C PRPF31 chr19:54618790-54635150:+ -0.38 -6.03 3.34E-9 Box Plot
THCA rs56388165 chr2:101063977 C/A LOC285359 chr3:101431278-101432259:+ 0.35 5.9 6.72E-9 Box Plot
THCA rs56388920 chr8:51457064 G/A EMID2 chr7:101006122-101202304:+ -0.48 -6.57 1.29E-10 Box Plot
THCA rs56399694 chr3:90361837 G/A STX19 chr3:93733213-93747454:- 0.46 6.65 8.19E-11 Box Plot
THCA rs56401801 chr6:27301512 T/A ZFP57 chr6:29640169-29648887:- 0.73 7.43 4.94E-13 Box Plot
THCA rs56402605 chr2:101062624 T/C LOC285359 chr3:101431278-101432259:+ 0.35 5.9 6.72E-9 Box Plot
THCA rs56405707 chr6:27640246 G/A BTN3A2 chr6:26365387-26378548:+ -0.89 -12.65 7.92E-32 Box Plot
THCA rs56405707 chr6:27640246 G/A RNF5P1 chr8:38458179-38458718:- 0.68 5.9 7.05E-9 Box Plot
THCA rs56405707 chr6:27640246 G/A ZFP57 chr6:29640169-29648887:- 0.9 8.51 2.31E-16 Box Plot
THCA rs56407824 chr2:101195413 C/T LOC285359 chr3:101431278-101432259:+ 0.38 7.25 1.67E-12 Box Plot
THCA rs56408359 chr2:132263238 T/G CCDC74B chr2:130896860-130902707:- 0.41 7.38 6.97E-13 Box Plot
THCA rs565138 chr10:8234485 A/G LRRC48 chr17:17876127-17920203:+ 0.21 5.9 6.89E-9 Box Plot
THCA rs56654851 chr8:10162832 T/C SGK223 chr8:8175258-8244008:- -0.32 -5.99 4.1E-9 Box Plot
THCA rs56675463 chr7:66245900 A/G CCT6P1 chr7:65216129-65228341:+ 0.43 6.68 6.61E-11 Box Plot
THCA rs56695318 chr2:132198605 G/C CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot